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Publications

 

Journals Papers

 

Conference Abstracts and Proceeding Papers

  • Vélez Lopez, O., Meléndez, L., Roche Lima, A., Carrasquillo Carrión, K., Salgado Ramírez, C., Cantres Rosario, Y., Machin Martínez, M. Intracellular Tandem Mass Tag (TMT) Proteomic Analyses of HIV-1 Infected Macrophages after Cocaine and Sig1R Antagonist (BD1047) Treatments. HUPO 2018 World Congress, Orlando, FL. September 30 - October 3, 2018.
  • Roche-Lima, A., Rodríguez J., Claudio, K., Carrasquillo-Carrión, K., Nieves, B., Massey, S., Duconge, J. Web Interface for Populational and Local Specific Ancestry Analysis in Hispanics. AGBT Precision Health, 3rd Annual Meeting, La Jolla, California, September 6-8, 2018.
  • Hernandez-Suarez, D., Yordan-Lopez, N., Villablanca, P., González-Sepúlveda, L., Wiley, J., Roche-Lima, A., Nieves-Rodriguez, B., Lopez-Candales, A., Cox, P., Ramakrishna, H. TCT-173 Racial Disparities in Patients Undergoing Transcatheter Aortic Valve Replacement: Insights of the Healthcare Cost and Utilization Project's National Inpatient Sample. Journal of the American College of Cardiology. Volume 72, Issue 13 Supplement, September 2018. doi: 10.1016/j.jacc.2018.08.1286
  • Gonzalez-Pons, M., Rovira Torres, L.N., Carrasquillo, K., Montes, I., Pérez-Mayoral, J., Roche, A., Napoles, A.M., Byun, J.S., Gardner, K., Perez-Stable, E., Cruz-Correa, M.R. Mutational Landscape of Early-onset Colorectal Cancer Tumors in Hispanics. Digestive Disease week, San Diego, California, May 18-21, 2019.
  • Roche-Lima, A., Rodríguez J., Claudio, K., Carrasquillo-Carrión, K., Nieves, B., Massey, S., Duconge, J. Web Interface for Populational and Local Specific Ancestry Analysis in Hispanics. At AGBT Precision Health, 3rd Annual Meeting, La Jolla, California, September 6-8, 2018.
  • Carrasquillo-Carrion, K., Ramon Gomez-Moreno, R., Velazquez, D.M., Cruz, J., Rogozin, I.B., Baerga, A., and Roche-Lima, A. Human Microbiome Project database to Determine Genotoxic and/or Pro-Inflammatory Bacterial Genes in Gut Metagenomic. 37th Annual Research and Education Forum. University of Puerto Rico Medical Sciences Campus. San Juan, Puerto Rico. April 19 – 21, 2017.
  • Velazquez, D.M., Carrasquillo-Carrión, K., Apiz, J., Vivas-Mejía, P. and Roche-Lima, A. Bioinformatic Analysis to Associate miRNA and Cancer in Hispanics Populations Using Large Databases. 37th Annual Research and Education Forum. University of Puerto Rico Medical Sciences Campus. San Juan, Puerto Rico. April 19 – 21, 2017.
  • Roche-Lima, A. (co-author). Novel Salivary Proteomics Analysis in Puerto Ricans with left Lip/Palate. International Association for Dental Research conference. San Francisco, California. March 22-25, 2017.
  • Roche-Lima, A. (co-author). Proteomic Saliva Analysis for Obesity and Periodontal Disease (PD) in Hispanic Adolescents. International Association for Dental Research conference. San Francisco, California. March 22-25, 2017.
  • Roche-Lima, A. (main author). Predicting Patient Outcomes using Learning Edit Costs based on Stochastics Finite-State Transducers. Annual Conference on Neural Information Processing Systems (NIPS), Workshop Machine Learning in Health Care. Barcelona, Spain. December 4-11, 2016.
  • Roche-Lima, A. (co-author). Secretome of monocytes-derived macrophages from patients with chikungunya-induced chronic arthralgia/arthritis. Conference ASTMH. Annual Meeting. Atlanta, Georgia. November 13 – 17, 2016.
  • Roche-Lima, A. (main author), Carrasquillo, K., Velazquez, D., Apiz, J. Vivas, P.; Bioinformatics Tools to Associate miRNAs to cancer focused on Hispanics. Conference Addressing Health Disparities: The Role of Translational Research. Nashville, Tennessee. October 10, 2016.
  • Roche-Lima, A. (author). Supervised Learning Methods to Predict Metabolic Pathways. Published in the proceedings of Advancing Computational Biology @ Howard University Symposium. Washington D.C. April 2016.
  • Roche-Lima, A. and Ordoñez, P. (2015). Supervised Learning Methods based on Finite-State Transducers to Classify Physiological Data. Proceedings of Machine Learning in Health Care, NIPS, Montreal, December, 2015.
  • Roche-Lima, A. Predicting Metabolic Networks through Pairwise Rational Kernels. (2015). Published in the proceedings of Eighth RECOMB/ISCB Conference on Regulatory and Systems Genomics. Philadelphia. November, 2015.
  • Roche-Lima, A.; Domaratzki, M., Fristensky, B. (2014). Pairwise Rational Kernels Obtained by Automaton Operations. Submitted to CIAA'2014. International Conference of Implementation and Application of Automata. February 2014.
  • Roche-Lima, A., Domaratzki, M., Fristensky, B. (2013). Supervised Learning Methods to Infer Metabolic Network using Sequence and Non-sequence Kernels. Proceedings of the International Workshop Machine Learning in System Biology in Conference ISMB/ECCB'13. Berlin, Germany. July 19 - 20, 2013.
  • Roche-Lima, A. (2013). Metabolic Network Inference using Sequence Kernels. Proceedings of International Conference Intelligent Systems for Molecular Biology and European Conference of Computational Biology. Berlin, Germany. July 19 - 20, 2013.
  • Roche-Lima, A., Domaratzki, M., Fristensky, B., Gordon, N., Alvare, G., Zhang, J. (2012). Finite-State Transducer Learning Approaches Applied to Metabolic Pathways in Bacteria. In Proceedings of the European Conference of Computational Biology, ECBB12. Basel, Switzerland. September 9 - 12, 2012.
  • Alvare, G.; Roche-Lima, A.; Fristensky, B. (2012). BioLegato: A Programmable, Object-Oriented Graphic User Interface.
    Proceedings of APBC 2012 - The Tenth Asia Pacific Bioinformatics Conference. Melbourne, Australia. January 17 - 19, 2012. (Research Excellence Paper Award).
  • Roche-Lima, A., Thulasiram, R.K. (2011). A Parallel Conditional Transducer Learning Algorithm Applied to Bioinformatics. In proceeding of the International Conference. HPCS 2011: High Performance Computer in Medical Science. UQAM, Montreal, QC, Canada. June 15-17, 2011.

 

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